Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 AC104076.2-201ENST00000448912 469 ntBASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
ECHDC1Q9NTX5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.58■■□□□ 1.2
ECHDC1Q9NTX5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
ECHDC1Q9NTX5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.58■■□□□ 1.2
ECHDC1Q9NTX5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
ECHDC1Q9NTX5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
ECHDC1Q9NTX5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
ECHDC1Q9NTX5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 MIR3917-201ENST00000580971 93 ntBASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
ECHDC1Q9NTX5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 MIR149-201ENST00000384879 89 ntBASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 AC099343.3-201ENST00000605834 2503 ntBASIC22.56■■□□□ 1.2
ECHDC1Q9NTX5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 TMPOP1-202ENST00000424642 1267 ntBASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 KRT18P21-201ENST00000515767 1272 ntBASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 SDHAP2-201ENST00000455183 2001 ntBASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ECHDC1Q9NTX5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms