Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C12orf4Q9NQ89 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C12orf4Q9NQ89 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C12orf4Q9NQ89 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
C12orf4Q9NQ89 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
C12orf4Q9NQ89 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C12orf4Q9NQ89 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C12orf4Q9NQ89 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C12orf4Q9NQ89 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 CROCCP5-201ENST00000436658 830 ntBASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.12■□□□□ 0.17
C12orf4Q9NQ89 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 WIZP1-201ENST00000531444 2299 ntBASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 SLC29A4P1-201ENST00000398760 971 ntBASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 KRT18P16-201ENST00000510337 1294 ntBASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C12orf4Q9NQ89 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 TUBB8P6-201ENST00000436895 1288 ntBASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 AC083906.2-201ENST00000511578 360 ntBASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms