Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NXF3Q9H4D5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20■□□□□ 0.79
NXF3Q9H4D5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20■□□□□ 0.79
NXF3Q9H4D5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20■□□□□ 0.79
NXF3Q9H4D5 CHCHD2P8-201ENST00000429873 447 ntBASIC20■□□□□ 0.79
NXF3Q9H4D5 KRT126P-201ENST00000549467 1181 ntBASIC20■□□□□ 0.79
NXF3Q9H4D5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NXF3Q9H4D5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20■□□□□ 0.79
NXF3Q9H4D5 AL390719.2-201ENST00000606993 987 ntBASIC20■□□□□ 0.79
NXF3Q9H4D5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
NXF3Q9H4D5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20■□□□□ 0.79
NXF3Q9H4D5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20■□□□□ 0.79
NXF3Q9H4D5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20■□□□□ 0.79
NXF3Q9H4D5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
NXF3Q9H4D5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20■□□□□ 0.79
NXF3Q9H4D5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NXF3Q9H4D5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NXF3Q9H4D5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 AC024563.2-201ENST00000603282 481 ntBASIC19.98■□□□□ 0.79
NXF3Q9H4D5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NXF3Q9H4D5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 IGHGP-201ENST00000390555 1178 ntBASIC19.97■□□□□ 0.79
NXF3Q9H4D5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 GPR32P1-201ENST00000601788 811 ntBASIC19.97■□□□□ 0.79
NXF3Q9H4D5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.97■□□□□ 0.79
NXF3Q9H4D5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms