Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 HLA-L-209ENST00000420110 1011 ntBASIC18.68■□□□□ 0.58
VPS11Q9H270 POU5F1P3-201ENST00000428824 1078 ntBASIC18.68■□□□□ 0.58
VPS11Q9H270 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS11Q9H270 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS11Q9H270 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
VPS11Q9H270 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
VPS11Q9H270 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
VPS11Q9H270 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS11Q9H270 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS11Q9H270 KRT8P11-201ENST00000409686 1436 ntBASIC18.67■□□□□ 0.58
VPS11Q9H270 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS11Q9H270 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.67■□□□□ 0.58
VPS11Q9H270 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS11Q9H270 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS11Q9H270 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS11Q9H270 KRT16P5-201ENST00000455284 522 ntBASIC18.67■□□□□ 0.58
VPS11Q9H270 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
VPS11Q9H270 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS11Q9H270 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
VPS11Q9H270 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 AC068587.9-201ENST00000641814 219 ntBASIC18.67■□□□□ 0.58
VPS11Q9H270 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 AC135776.1-201ENST00000319817 2481 ntBASIC18.67■□□□□ 0.58
VPS11Q9H270 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 PKD1P1-201ENST00000458669 6805 ntBASIC18.67■□□□□ 0.58
VPS11Q9H270 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VPS11Q9H270 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS11Q9H270 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS11Q9H270 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.66■□□□□ 0.58
VPS11Q9H270 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VPS11Q9H270 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 AC134043.2-201ENST00000624206 2238 ntBASIC18.66■□□□□ 0.58
VPS11Q9H270 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VPS11Q9H270 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VPS11Q9H270 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.66■□□□□ 0.58
VPS11Q9H270 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.66■□□□□ 0.58
VPS11Q9H270 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VPS11Q9H270 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
VPS11Q9H270 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VPS11Q9H270 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VPS11Q9H270 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS11Q9H270 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VPS11Q9H270 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS11Q9H270 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VPS11Q9H270 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
VPS11Q9H270 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
VPS11Q9H270 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VPS11Q9H270 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
VPS11Q9H270 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VPS11Q9H270 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.65■□□□□ 0.58
VPS11Q9H270 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS11Q9H270 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VPS11Q9H270 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
VPS11Q9H270 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.65■□□□□ 0.58
VPS11Q9H270 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
VPS11Q9H270 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.65■□□□□ 0.58
VPS11Q9H270 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.65■□□□□ 0.58
VPS11Q9H270 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms