Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 AC012317.2-201ENST00000623305 2251 ntBASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 NME4-202ENST00000382940 766 ntTSL 3 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 TESC-206ENST00000541210 936 ntTSL 3 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 ANKRD18DP-204ENST00000455355 1975 ntBASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LCE3DQ9BYE3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AC116351.2-201ENST00000606540 1585 ntBASIC5□□□□□ -1.61
LCE3DQ9BYE3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms