Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 AC006011.2-201ENST00000621313 1158 ntBASIC16.54■□□□□ 0.24
USB1Q9BQ65 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 AC092647.4-201ENST00000457211 535 ntBASIC16.53■□□□□ 0.24
USB1Q9BQ65 YBX1P2-201ENST00000489612 999 ntBASIC16.53■□□□□ 0.24
USB1Q9BQ65 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 AC022616.7-201ENST00000525383 220 ntBASIC16.53■□□□□ 0.24
USB1Q9BQ65 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USB1Q9BQ65 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.53■□□□□ 0.24
USB1Q9BQ65 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USB1Q9BQ65 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USB1Q9BQ65 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USB1Q9BQ65 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USB1Q9BQ65 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USB1Q9BQ65 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USB1Q9BQ65 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USB1Q9BQ65 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USB1Q9BQ65 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USB1Q9BQ65 AC117947.1-201ENST00000427448 529 ntBASIC16.52■□□□□ 0.24
USB1Q9BQ65 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 KRT18P35-201ENST00000510488 1269 ntBASIC16.52■□□□□ 0.24
USB1Q9BQ65 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USB1Q9BQ65 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 AL445228.2-201ENST00000605589 952 ntBASIC16.52■□□□□ 0.24
USB1Q9BQ65 AC139887.4-201ENST00000607877 719 ntBASIC16.52■□□□□ 0.24
USB1Q9BQ65 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USB1Q9BQ65 AC005786.4-201ENST00000623369 682 ntBASIC16.52■□□□□ 0.24
USB1Q9BQ65 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.52■□□□□ 0.24
USB1Q9BQ65 AC093484.2-201ENST00000580996 2166 ntBASIC16.52■□□□□ 0.24
USB1Q9BQ65 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
USB1Q9BQ65 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.52■□□□□ 0.23
USB1Q9BQ65 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.52■□□□□ 0.23
USB1Q9BQ65 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
USB1Q9BQ65 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
USB1Q9BQ65 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
USB1Q9BQ65 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.52■□□□□ 0.23
USB1Q9BQ65 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USB1Q9BQ65 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
USB1Q9BQ65 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USB1Q9BQ65 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USB1Q9BQ65 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
USB1Q9BQ65 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USB1Q9BQ65 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.51■□□□□ 0.23
USB1Q9BQ65 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.51■□□□□ 0.23
USB1Q9BQ65 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USB1Q9BQ65 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
USB1Q9BQ65 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.51■□□□□ 0.23
USB1Q9BQ65 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.51■□□□□ 0.23
USB1Q9BQ65 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.51■□□□□ 0.23
USB1Q9BQ65 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.51■□□□□ 0.23
USB1Q9BQ65 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.51■□□□□ 0.23
USB1Q9BQ65 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.51■□□□□ 0.23
USB1Q9BQ65 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.51■□□□□ 0.23
USB1Q9BQ65 AC008622.2-201ENST00000617006 1229 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms