Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LITAFQ99732 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.35□□□□□ -0.43
LITAFQ99732 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LITAFQ99732 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LITAFQ99732 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LITAFQ99732 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
LITAFQ99732 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.34□□□□□ -0.43
LITAFQ99732 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.34□□□□□ -0.43
LITAFQ99732 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.34□□□□□ -0.43
LITAFQ99732 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LITAFQ99732 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LITAFQ99732 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC12.34□□□□□ -0.43
LITAFQ99732 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LITAFQ99732 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LITAFQ99732 GPX1P1-201ENST00000388829 606 ntBASIC12.34□□□□□ -0.43
LITAFQ99732 AC073210.2-201ENST00000430369 194 ntBASIC12.34□□□□□ -0.43
LITAFQ99732 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.34□□□□□ -0.43
LITAFQ99732 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC12.34□□□□□ -0.43
LITAFQ99732 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LITAFQ99732 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 KRT18P14-201ENST00000534205 1250 ntBASIC12.34□□□□□ -0.43
LITAFQ99732 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC12.34□□□□□ -0.43
LITAFQ99732 GALNS-213ENST00000569433 723 ntTSL 3 BASIC12.34□□□□□ -0.43
LITAFQ99732 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC12.34□□□□□ -0.43
LITAFQ99732 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.34□□□□□ -0.43
LITAFQ99732 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.34□□□□□ -0.43
LITAFQ99732 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
LITAFQ99732 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LITAFQ99732 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
LITAFQ99732 AC068338.2-201ENST00000563278 1430 ntBASIC12.34□□□□□ -0.43
LITAFQ99732 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LITAFQ99732 AL357033.4-201ENST00000617703 1807 ntBASIC12.34□□□□□ -0.43
LITAFQ99732 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LITAFQ99732 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LITAFQ99732 KRT8P32-201ENST00000512863 1461 ntBASIC12.34□□□□□ -0.43
LITAFQ99732 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
LITAFQ99732 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.33□□□□□ -0.43
LITAFQ99732 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
LITAFQ99732 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LITAFQ99732 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.33□□□□□ -0.44
LITAFQ99732 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LITAFQ99732 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
LITAFQ99732 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.33□□□□□ -0.44
LITAFQ99732 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC12.33□□□□□ -0.44
LITAFQ99732 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC12.33□□□□□ -0.44
LITAFQ99732 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LITAFQ99732 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LITAFQ99732 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms