Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB40CQ96S21 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB40CQ96S21 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB40CQ96S21 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB40CQ96S21 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40CQ96S21 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.05■□□□□ -0
RAB40CQ96S21 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.05■□□□□ -0
RAB40CQ96S21 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.05■□□□□ -0
RAB40CQ96S21 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB40CQ96S21 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40CQ96S21 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.05■□□□□ -0
RAB40CQ96S21 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
RAB40CQ96S21 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
RAB40CQ96S21 FLJ13224-201ENST00000313737 1514 ntBASIC15.05■□□□□ -0
RAB40CQ96S21 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB40CQ96S21 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RAB40CQ96S21 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40CQ96S21 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.05■□□□□ -0
RAB40CQ96S21 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
RAB40CQ96S21 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40CQ96S21 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40CQ96S21 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.05■□□□□ -0
RAB40CQ96S21 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40CQ96S21 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40CQ96S21 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RAB40CQ96S21 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.04■□□□□ -0
RAB40CQ96S21 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 AC012317.2-201ENST00000623305 2251 ntBASIC15.04■□□□□ -0
RAB40CQ96S21 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.04■□□□□ -0
RAB40CQ96S21 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.04■□□□□ -0
RAB40CQ96S21 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAB40CQ96S21 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.04■□□□□ -0
RAB40CQ96S21 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.04■□□□□ -0
RAB40CQ96S21 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.04■□□□□ -0
RAB40CQ96S21 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RAB40CQ96S21 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAB40CQ96S21 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.04■□□□□ -0
RAB40CQ96S21 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.04■□□□□ -0
RAB40CQ96S21 NCF1B-203ENST00000435988 1254 ntBASIC15.04■□□□□ -0
RAB40CQ96S21 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.04■□□□□ -0
RAB40CQ96S21 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.04■□□□□ -0
RAB40CQ96S21 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB40CQ96S21 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.04■□□□□ -0
RAB40CQ96S21 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.04■□□□□ -0
RAB40CQ96S21 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAB40CQ96S21 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
RAB40CQ96S21 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.03■□□□□ -0
RAB40CQ96S21 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.03■□□□□ -0
RAB40CQ96S21 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.03■□□□□ -0
RAB40CQ96S21 AC090192.1-201ENST00000517740 490 ntBASIC15.03■□□□□ -0
RAB40CQ96S21 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.03■□□□□ -0
RAB40CQ96S21 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.03■□□□□ -0
RAB40CQ96S21 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.03■□□□□ -0
RAB40CQ96S21 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.03■□□□□ -0
RAB40CQ96S21 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.03■□□□□ -0
RAB40CQ96S21 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.03■□□□□ -0
RAB40CQ96S21 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.03■□□□□ -0
RAB40CQ96S21 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.03■□□□□ -0
RAB40CQ96S21 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.03■□□□□ -0
RAB40CQ96S21 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.03■□□□□ -0
RAB40CQ96S21 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
RAB40CQ96S21 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms