Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 AC004854.2-201ENST00000608450 1441 ntBASIC15.9■□□□□ 0.14
CITED4Q96RK1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 AP004607.4-201ENST00000530158 1459 ntBASIC15.9■□□□□ 0.14
CITED4Q96RK1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
CITED4Q96RK1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 AL109923.1-201ENST00000618799 583 ntBASIC15.89■□□□□ 0.13
CITED4Q96RK1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CITED4Q96RK1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CITED4Q96RK1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 AC055733.4-201ENST00000638462 1354 ntBASIC15.88■□□□□ 0.13
CITED4Q96RK1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 AL355802.2-201ENST00000402069 882 ntBASIC15.88■□□□□ 0.13
CITED4Q96RK1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 AC079140.4-201ENST00000507448 529 ntBASIC15.88■□□□□ 0.13
CITED4Q96RK1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CITED4Q96RK1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CITED4Q96RK1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.87■□□□□ 0.13
CITED4Q96RK1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.87■□□□□ 0.13
CITED4Q96RK1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CITED4Q96RK1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CITED4Q96RK1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.87■□□□□ 0.13
CITED4Q96RK1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CITED4Q96RK1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.87■□□□□ 0.13
CITED4Q96RK1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.87■□□□□ 0.13
CITED4Q96RK1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CITED4Q96RK1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CITED4Q96RK1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CITED4Q96RK1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CITED4Q96RK1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CITED4Q96RK1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CITED4Q96RK1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CITED4Q96RK1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms