Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.48■□□□□ 0.39
NR1H4Q96RI1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 CDV3P1-201ENST00000471403 739 ntBASIC17.47■□□□□ 0.39
NR1H4Q96RI1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H4Q96RI1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 UBALD1-205ENST00000590891 2641 ntBASIC17.46■□□□□ 0.39
NR1H4Q96RI1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 LINC02228-203ENST00000641970 1355 ntBASIC17.46■□□□□ 0.39
NR1H4Q96RI1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 AC027612.3-201ENST00000413684 1047 ntBASIC17.46■□□□□ 0.39
NR1H4Q96RI1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.46■□□□□ 0.39
NR1H4Q96RI1 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.46■□□□□ 0.38
NR1H4Q96RI1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NR1H4Q96RI1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NR1H4Q96RI1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
NR1H4Q96RI1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms