Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 AC131212.4-201ENST00000623606 975 ntBASIC16.9■□□□□ 0.3
SNX18Q96RF0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 ANO7L1-203ENST00000602586 1720 ntBASIC16.9■□□□□ 0.3
SNX18Q96RF0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX18Q96RF0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX18Q96RF0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SNX18Q96RF0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNX18Q96RF0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
SNX18Q96RF0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNX18Q96RF0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNX18Q96RF0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SNX18Q96RF0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX18Q96RF0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SNX18Q96RF0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX18Q96RF0 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.89■□□□□ 0.29
SNX18Q96RF0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 NIFKP9-201ENST00000419265 221 ntBASIC16.89■□□□□ 0.29
SNX18Q96RF0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.89■□□□□ 0.29
SNX18Q96RF0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX18Q96RF0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.89■□□□□ 0.29
SNX18Q96RF0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.89■□□□□ 0.29
SNX18Q96RF0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.89■□□□□ 0.29
SNX18Q96RF0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX18Q96RF0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX18Q96RF0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 WIZP1-201ENST00000531444 2299 ntBASIC16.88■□□□□ 0.29
SNX18Q96RF0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 Z99916.2-201ENST00000604037 246 ntBASIC16.88■□□□□ 0.29
SNX18Q96RF0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
SNX18Q96RF0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX18Q96RF0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 AC004980.1-204ENST00000429707 299 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms