Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 AL355472.2-201ENST00000422958 438 ntBASIC14.02□□□□□ -0.17
AP1S3Q96PC3 CNN2P6-201ENST00000439038 900 ntBASIC14.02□□□□□ -0.17
AP1S3Q96PC3 AC034268.1-201ENST00000441047 882 ntBASIC14.02□□□□□ -0.17
AP1S3Q96PC3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S3Q96PC3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 AC124067.4-201ENST00000519691 2379 ntBASIC14.01□□□□□ -0.17
AP1S3Q96PC3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 AC090164.3-201ENST00000610780 2143 ntBASIC14.01□□□□□ -0.17
AP1S3Q96PC3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S3Q96PC3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
AP1S3Q96PC3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14□□□□□ -0.17
AP1S3Q96PC3 AC093525.10-201ENST00000625130 1569 ntBASIC14□□□□□ -0.17
AP1S3Q96PC3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14□□□□□ -0.17
AP1S3Q96PC3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP1S3Q96PC3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14□□□□□ -0.17
AP1S3Q96PC3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14□□□□□ -0.17
AP1S3Q96PC3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14□□□□□ -0.17
AP1S3Q96PC3 IRX1P1-201ENST00000438849 1838 ntBASIC14□□□□□ -0.17
AP1S3Q96PC3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14□□□□□ -0.17
AP1S3Q96PC3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14□□□□□ -0.17
AP1S3Q96PC3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14□□□□□ -0.17
AP1S3Q96PC3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14□□□□□ -0.17
AP1S3Q96PC3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14□□□□□ -0.17
AP1S3Q96PC3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 OR10C1-204ENST00000622521 1039 ntBASIC14□□□□□ -0.17
AP1S3Q96PC3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14□□□□□ -0.17
AP1S3Q96PC3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14□□□□□ -0.17
AP1S3Q96PC3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14□□□□□ -0.17
AP1S3Q96PC3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S3Q96PC3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AP1S3Q96PC3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms