Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 AL023284.2-201ENST00000405850 579 ntBASIC18.74■□□□□ 0.59
LRRC39Q96DD0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 AC008622.2-201ENST00000617006 1229 ntBASIC18.74■□□□□ 0.59
LRRC39Q96DD0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 AC034236.2-201ENST00000606662 1610 ntBASIC18.74■□□□□ 0.59
LRRC39Q96DD0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 MCCD1P1-208ENST00000445732 328 ntBASIC18.73■□□□□ 0.59
LRRC39Q96DD0 CA15P1-201ENST00000481698 905 ntBASIC18.73■□□□□ 0.59
LRRC39Q96DD0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.73■□□□□ 0.59
LRRC39Q96DD0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC39Q96DD0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 CD99P1-205ENST00000527459 561 ntBASIC18.72■□□□□ 0.59
LRRC39Q96DD0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 FLJ13224-201ENST00000313737 1514 ntBASIC18.72■□□□□ 0.59
LRRC39Q96DD0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC39Q96DD0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 AC067852.2-201ENST00000590513 2313 ntBASIC18.71■□□□□ 0.59
LRRC39Q96DD0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.71■□□□□ 0.59
LRRC39Q96DD0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.71■□□□□ 0.59
LRRC39Q96DD0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms