Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDF1Q96CC6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RHBDF1Q96CC6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RHBDF1Q96CC6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
RHBDF1Q96CC6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDF1Q96CC6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDF1Q96CC6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDF1Q96CC6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RHBDF1Q96CC6 AC005332.8-201ENST00000622750 2735 ntBASIC18.07■□□□□ 0.48
RHBDF1Q96CC6 KRT8P50-201ENST00000562022 1438 ntBASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 AC007663.1-201ENST00000438948 1240 ntBASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 AC116562.4-202ENST00000641738 218 ntBASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDF1Q96CC6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 TSPY14P-201ENST00000303979 915 ntBASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 BX088651.1-201ENST00000540551 451 ntBASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 AC020763.4-201ENST00000623414 4170 ntBASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDF1Q96CC6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 ABALON-201ENST00000629058 1903 ntBASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 CR769767.2-201ENST00000622735 460 ntBASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 KRT8P9-201ENST00000558927 1449 ntBASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDF1Q96CC6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RHBDF1Q96CC6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RHBDF1Q96CC6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.03■□□□□ 0.48
RHBDF1Q96CC6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.03■□□□□ 0.48
RHBDF1Q96CC6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RHBDF1Q96CC6 CYP2D8P-201ENST00000433633 1490 ntBASIC18.03■□□□□ 0.48
RHBDF1Q96CC6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RHBDF1Q96CC6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms