Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 KRT8P50-201ENST00000562022 1438 ntBASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 HLA-J-201ENST00000462773 1622 ntBASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 AC083906.6-201ENST00000641366 219 ntBASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 AC068587.9-201ENST00000641814 219 ntBASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 AC079781.4-201ENST00000641908 219 ntBASIC20.08■□□□□ 0.81
TRIM43Q96BQ3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.08■□□□□ 0.8
TRIM43Q96BQ3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM43Q96BQ3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM43Q96BQ3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM43Q96BQ3 AP005117.1-201ENST00000584346 1413 ntBASIC20.08■□□□□ 0.8
TRIM43Q96BQ3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM43Q96BQ3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.8
TRIM43Q96BQ3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM43Q96BQ3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TRIM43Q96BQ3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM43Q96BQ3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 DNAJB3-201ENST00000446806 729 ntBASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 AC068472.1-201ENST00000474589 881 ntBASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 OR7E14P-202ENST00000530490 1290 ntBASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 AC040169.1-201ENST00000565382 521 ntBASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 Z98044.1-201ENST00000632503 1764 ntBASIC20.06■□□□□ 0.8
TRIM43Q96BQ3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms