Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF25Q96BH1 AL158047.1-201ENST00000445918 881 ntBASIC19.52■□□□□ 0.72
RNF25Q96BH1 AC098590.1-201ENST00000468126 897 ntBASIC19.52■□□□□ 0.72
RNF25Q96BH1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.52■□□□□ 0.72
RNF25Q96BH1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF25Q96BH1 CD177P1-201ENST00000606252 935 ntBASIC19.52■□□□□ 0.72
RNF25Q96BH1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF25Q96BH1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF25Q96BH1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF25Q96BH1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF25Q96BH1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF25Q96BH1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RNF25Q96BH1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF25Q96BH1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF25Q96BH1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.52■□□□□ 0.71
RNF25Q96BH1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RNF25Q96BH1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF25Q96BH1 AC073592.3-201ENST00000625118 1834 ntBASIC19.51■□□□□ 0.71
RNF25Q96BH1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RNF25Q96BH1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF25Q96BH1 HMGB3P14-201ENST00000494195 599 ntBASIC19.51■□□□□ 0.71
RNF25Q96BH1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF25Q96BH1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF25Q96BH1 OR13I1P-201ENST00000609811 1264 ntBASIC19.51■□□□□ 0.71
RNF25Q96BH1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF25Q96BH1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF25Q96BH1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF25Q96BH1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF25Q96BH1 RCC2P3-201ENST00000418112 1537 ntBASIC19.51■□□□□ 0.71
RNF25Q96BH1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF25Q96BH1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF25Q96BH1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF25Q96BH1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF25Q96BH1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF25Q96BH1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 FSCN1P1-201ENST00000568912 1481 ntBASIC19.5■□□□□ 0.71
RNF25Q96BH1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF25Q96BH1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF25Q96BH1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF25Q96BH1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF25Q96BH1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF25Q96BH1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF25Q96BH1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RNF25Q96BH1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF25Q96BH1 COA4-204ENST00000541455 1038 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF25Q96BH1 AP000692.2-201ENST00000608391 879 ntBASIC19.49■□□□□ 0.71
RNF25Q96BH1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF25Q96BH1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RNF25Q96BH1 ABALON-201ENST00000629058 1903 ntBASIC19.49■□□□□ 0.71
RNF25Q96BH1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF25Q96BH1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF25Q96BH1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF25Q96BH1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF25Q96BH1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms