Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HPS3Q969F9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS3Q969F9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS3Q969F9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS3Q969F9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS3Q969F9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.54■□□□□ 0.88
HPS3Q969F9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.54■□□□□ 0.88
HPS3Q969F9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.54■□□□□ 0.88
HPS3Q969F9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HPS3Q969F9 AL390961.4-201ENST00000623958 2535 ntBASIC20.54■□□□□ 0.88
HPS3Q969F9 AC034236.2-201ENST00000606662 1610 ntBASIC20.54■□□□□ 0.88
HPS3Q969F9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HPS3Q969F9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HPS3Q969F9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HPS3Q969F9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.54■□□□□ 0.88
HPS3Q969F9 KRT18P41-201ENST00000518924 1277 ntBASIC20.54■□□□□ 0.88
HPS3Q969F9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
HPS3Q969F9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 LINC01568-207ENST00000641790 1380 ntBASIC20.54■□□□□ 0.88
HPS3Q969F9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HPS3Q969F9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
HPS3Q969F9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.54■□□□□ 0.88
HPS3Q969F9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS3Q969F9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HPS3Q969F9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS3Q969F9 ESPNP-201ENST00000270691 2015 ntBASIC20.53■□□□□ 0.88
HPS3Q969F9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS3Q969F9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HPS3Q969F9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
HPS3Q969F9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.53■□□□□ 0.88
HPS3Q969F9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS3Q969F9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.53■□□□□ 0.88
HPS3Q969F9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS3Q969F9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.53■□□□□ 0.88
HPS3Q969F9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS3Q969F9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS3Q969F9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS3Q969F9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS3Q969F9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS3Q969F9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS3Q969F9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HPS3Q969F9 AL354751.1-201ENST00000412768 1863 ntBASIC20.53■□□□□ 0.88
HPS3Q969F9 AC135776.1-201ENST00000319817 2481 ntBASIC20.53■□□□□ 0.88
HPS3Q969F9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS3Q969F9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HPS3Q969F9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.53■□□□□ 0.88
HPS3Q969F9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.53■□□□□ 0.88
HPS3Q969F9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HPS3Q969F9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS3Q969F9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS3Q969F9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS3Q969F9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HPS3Q969F9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HPS3Q969F9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS3Q969F9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS3Q969F9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HPS3Q969F9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HPS3Q969F9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.52■□□□□ 0.88
HPS3Q969F9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.52■□□□□ 0.88
HPS3Q969F9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.52■□□□□ 0.88
HPS3Q969F9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.52■□□□□ 0.88
HPS3Q969F9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.52■□□□□ 0.88
HPS3Q969F9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.52■□□□□ 0.88
HPS3Q969F9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS3Q969F9 AC010653.2-201ENST00000623505 997 ntBASIC20.52■□□□□ 0.88
HPS3Q969F9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS3Q969F9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.52■□□□□ 0.88
HPS3Q969F9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HPS3Q969F9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HPS3Q969F9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.51■□□□□ 0.87
HPS3Q969F9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS3Q969F9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.51■□□□□ 0.87
HPS3Q969F9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.51■□□□□ 0.87
HPS3Q969F9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
HPS3Q969F9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HPS3Q969F9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS3Q969F9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS3Q969F9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HPS3Q969F9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.51■□□□□ 0.87
HPS3Q969F9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.51■□□□□ 0.87
HPS3Q969F9 WWOX-216ENST00000569818 525 ntBASIC20.51■□□□□ 0.87
HPS3Q969F9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms