Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 AC006116.8-202ENST00000587620 1550 ntBASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM4Q8WVI0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 AP001094.4-201ENST00000579008 2176 ntBASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM4Q8WVI0 AL357033.4-201ENST00000617703 1807 ntBASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 AC093787.1-201ENST00000450396 207 ntBASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 NTF6G-201ENST00000591094 616 ntBASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SMIM4Q8WVI0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.83■□□□□ 0.13
SMIM4Q8WVI0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
SMIM4Q8WVI0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
SMIM4Q8WVI0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.83■□□□□ 0.13
SMIM4Q8WVI0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMIM4Q8WVI0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMIM4Q8WVI0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SMIM4Q8WVI0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms