Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC008687.5-201ENST00000593746 558 ntBASIC16.63■□□□□ 0.25
CHD6Q8TD26 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD6Q8TD26 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CHD6Q8TD26 KRT8P7-201ENST00000533003 1432 ntBASIC16.63■□□□□ 0.25
CHD6Q8TD26 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD6Q8TD26 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD6Q8TD26 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD6Q8TD26 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD6Q8TD26 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD6Q8TD26 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD6Q8TD26 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD6Q8TD26 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHD6Q8TD26 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 BASP1P1-201ENST00000430708 665 ntBASIC16.62■□□□□ 0.25
CHD6Q8TD26 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 ACA64.2-201ENST00000459014 129 ntBASIC16.62■□□□□ 0.25
CHD6Q8TD26 AC067863.1-201ENST00000494933 530 ntBASIC16.62■□□□□ 0.25
CHD6Q8TD26 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.62■□□□□ 0.25
CHD6Q8TD26 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHD6Q8TD26 AC112777.1-201ENST00000540175 1423 ntBASIC16.62■□□□□ 0.25
CHD6Q8TD26 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.61■□□□□ 0.25
CHD6Q8TD26 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 CNN2P2-201ENST00000443536 909 ntBASIC16.61■□□□□ 0.25
CHD6Q8TD26 CNN2P3-201ENST00000450201 906 ntBASIC16.61■□□□□ 0.25
CHD6Q8TD26 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.61■□□□□ 0.25
CHD6Q8TD26 AL136317.3-201ENST00000618497 906 ntBASIC16.61■□□□□ 0.25
CHD6Q8TD26 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 MIR3180-4-201ENST00000582223 153 ntBASIC16.61■□□□□ 0.25
CHD6Q8TD26 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD6Q8TD26 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.61■□□□□ 0.25
CHD6Q8TD26 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.6■□□□□ 0.25
CHD6Q8TD26 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CHD6Q8TD26 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 AC079776.1-201ENST00000401540 1152 ntBASIC16.6■□□□□ 0.25
CHD6Q8TD26 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.6■□□□□ 0.25
CHD6Q8TD26 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.6■□□□□ 0.25
CHD6Q8TD26 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.6■□□□□ 0.25
CHD6Q8TD26 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.6■□□□□ 0.25
CHD6Q8TD26 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHD6Q8TD26 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 MIR943-201ENST00000401286 94 ntBASIC16.6■□□□□ 0.25
CHD6Q8TD26 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHD6Q8TD26 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.6■□□□□ 0.25
CHD6Q8TD26 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.6■□□□□ 0.25
CHD6Q8TD26 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD6Q8TD26 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms