Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 RNF126P1-202ENST00000569893 925 ntBASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 AP002414.4-201ENST00000589764 1148 ntBASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SHKBP1Q8TBC3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 AL691432.3-201ENST00000621860 400 ntBASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHKBP1Q8TBC3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 TSPY22P-201ENST00000427496 604 ntBASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 PRELID1P1-202ENST00000567272 903 ntBASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.44■□□□□ 0.7
SHKBP1Q8TBC3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.43■□□□□ 0.7
SHKBP1Q8TBC3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms