Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 AL138966.2-201ENST00000621997 464 ntBASIC19.87■□□□□ 0.77
LMO3Q8TAP4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LMO3Q8TAP4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMO3Q8TAP4 AC009102.3-201ENST00000623118 1491 ntBASIC19.86■□□□□ 0.77
LMO3Q8TAP4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 MIR149-201ENST00000384879 89 ntBASIC19.85■□□□□ 0.77
LMO3Q8TAP4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 ECEL1P3-201ENST00000427961 737 ntBASIC19.85■□□□□ 0.77
LMO3Q8TAP4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 AC097493.4-201ENST00000641197 219 ntBASIC19.85■□□□□ 0.77
LMO3Q8TAP4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMO3Q8TAP4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LMO3Q8TAP4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms