Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 AC126763.1-201ENST00000552015 2118 ntBASIC16.21■□□□□ 0.19
CPEB3Q8NE35 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 AC034236.2-201ENST00000606662 1610 ntBASIC16.21■□□□□ 0.19
CPEB3Q8NE35 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CPEB3Q8NE35 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CPEB3Q8NE35 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CPEB3Q8NE35 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CPEB3Q8NE35 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.21■□□□□ 0.18
CPEB3Q8NE35 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CPEB3Q8NE35 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.21■□□□□ 0.18
CPEB3Q8NE35 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 AC104581.1-202ENST00000635932 2618 ntBASIC16.2■□□□□ 0.18
CPEB3Q8NE35 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 SLC25A3P1-201ENST00000443844 931 ntBASIC16.2■□□□□ 0.18
CPEB3Q8NE35 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 AC005082.1-201ENST00000413042 2259 ntBASIC16.2■□□□□ 0.18
CPEB3Q8NE35 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPEB3Q8NE35 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 KRT18P41-201ENST00000518924 1277 ntBASIC16.19■□□□□ 0.18
CPEB3Q8NE35 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.19■□□□□ 0.18
CPEB3Q8NE35 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms