Protein–RNA interactions for Protein: Q8NCT1

ARRDC4, Arrestin domain-containing protein 4, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC4Q8NCT1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 TEX21P-204ENST00000641479 1693 ntBASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 AC092183.1-201ENST00000469884 875 ntBASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 BNIP3P18-201ENST00000593976 575 ntBASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 AC008608.2-201ENST00000606089 416 ntBASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 AC148477.8-201ENST00000624298 468 ntBASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ARRDC4Q8NCT1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 FAM220CP-201ENST00000395253 831 ntBASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARRDC4Q8NCT1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 AL158211.5-201ENST00000623583 2518 ntBASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 AC132008.2-207ENST00000454517 770 ntBASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 RPL13AP23-201ENST00000480739 586 ntBASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 AC139887.3-201ENST00000568585 713 ntBASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 AC114341.1-201ENST00000618070 349 ntBASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARRDC4Q8NCT1 ZNF259P1-201ENST00000407656 1365 ntBASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 AC243591.1-201ENST00000452967 1364 ntBASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 FEM1AP3-201ENST00000403722 1741 ntBASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 BX842568.4-201ENST00000421222 227 ntBASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARRDC4Q8NCT1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms