Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC4A11Q8NBS3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC4A11Q8NBS3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC4A11Q8NBS3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 DUX4L26-201ENST00000489078 1255 ntBASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 MIR3180-4-201ENST00000582223 153 ntBASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 AL157888.1-201ENST00000631930 593 ntBASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC4A11Q8NBS3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC4A11Q8NBS3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.64■□□□□ 0.74
SLC4A11Q8NBS3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SLC4A11Q8NBS3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC4A11Q8NBS3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.64■□□□□ 0.74
SLC4A11Q8NBS3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SLC4A11Q8NBS3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 AC104581.1-202ENST00000635932 2618 ntBASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SLC4A11Q8NBS3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 SPDYE15P-201ENST00000424157 909 ntBASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 AC063952.2-201ENST00000498792 1227 ntBASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 AC009113.1-201ENST00000570267 2443 ntBASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC4A11Q8NBS3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC4A11Q8NBS3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC4A11Q8NBS3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC4A11Q8NBS3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SLC4A11Q8NBS3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SLC4A11Q8NBS3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC4A11Q8NBS3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC4A11Q8NBS3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC4A11Q8NBS3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC4A11Q8NBS3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC4A11Q8NBS3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms