Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC097493.4-201ENST00000641197 219 ntBASIC19.04■□□□□ 0.64
PAF1Q8N7H5 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PAF1Q8N7H5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 AL049812.1-201ENST00000432563 2267 ntBASIC19.03■□□□□ 0.64
PAF1Q8N7H5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 MCCD1P1-208ENST00000445732 328 ntBASIC19.03■□□□□ 0.64
PAF1Q8N7H5 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.03■□□□□ 0.64
PAF1Q8N7H5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.03■□□□□ 0.64
PAF1Q8N7H5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.03■□□□□ 0.64
PAF1Q8N7H5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 KRT8P3-201ENST00000519669 1449 ntBASIC19.02■□□□□ 0.64
PAF1Q8N7H5 AC092338.2-201ENST00000568827 1415 ntBASIC19.02■□□□□ 0.64
PAF1Q8N7H5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 KRT18P57-201ENST00000443599 1254 ntBASIC19.02■□□□□ 0.64
PAF1Q8N7H5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.02■□□□□ 0.64
PAF1Q8N7H5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
PAF1Q8N7H5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PAF1Q8N7H5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PAF1Q8N7H5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 AC113347.1-201ENST00000413321 391 ntBASIC19.01■□□□□ 0.63
PAF1Q8N7H5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 AL023803.3-201ENST00000615559 522 ntBASIC19.01■□□□□ 0.63
PAF1Q8N7H5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms