Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 AC112907.2-201ENST00000448639 330 ntBASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 AC009102.3-201ENST00000623118 1491 ntBASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRAM1L1Q8N609 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAM1L1Q8N609 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 PVRIG2P-201ENST00000435460 978 ntBASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 AL671277.2-201ENST00000458060 996 ntBASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 HYMAI.1-201ENST00000620949 238 ntBASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
TRAM1L1Q8N609 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 AC004408.2-201ENST00000623613 2777 ntBASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 AC079602.3-201ENST00000623931 403 ntBASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 AC073592.3-201ENST00000625118 1834 ntBASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 AC126763.1-201ENST00000552015 2118 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms