Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 KRT8P32-201ENST00000512863 1461 ntBASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 AC024563.2-201ENST00000603282 481 ntBASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 KRT89P-201ENST00000620027 1478 ntBASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 LINC00167-201ENST00000530583 1419 ntBASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNPOQ8N3V7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 RN7SL606P-201ENST00000472779 293 ntBASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 AL592071.1-201ENST00000611956 408 ntBASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 BX640515.1-201ENST00000617215 977 ntBASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNPOQ8N3V7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 SAPCD2P3-201ENST00000455031 850 ntBASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 AC124864.1-201ENST00000623408 392 ntBASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.8■□□□□ 0.6
SYNPOQ8N3V7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 TEX21P-204ENST00000641479 1693 ntBASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms