Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 AP001269.4-201ENST00000609611 512 ntBASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 AL355877.3-201ENST00000622820 899 ntBASIC17.44■□□□□ 0.38
COL27A1Q8IZC6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 POLD2P1-201ENST00000511220 997 ntBASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL27A1Q8IZC6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL27A1Q8IZC6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 AF186996.4-201ENST00000467186 377 ntBASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 RNPS1P1-201ENST00000507437 918 ntBASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 SCARNA2-201ENST00000458748 420 ntBASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
COL27A1Q8IZC6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 INTS4P1-201ENST00000438455 1935 ntBASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 KRT18P13-201ENST00000400056 1290 ntBASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms