Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
RP1L1Q8IWN7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RP1L1Q8IWN7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RP1L1Q8IWN7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.77■□□□□ 0.28
RP1L1Q8IWN7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RP1L1Q8IWN7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.77■□□□□ 0.27
RP1L1Q8IWN7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RP1L1Q8IWN7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RP1L1Q8IWN7 AC243591.1-201ENST00000452967 1364 ntBASIC16.77■□□□□ 0.27
RP1L1Q8IWN7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RP1L1Q8IWN7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 PGAM5P1-201ENST00000518923 814 ntBASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
RP1L1Q8IWN7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 AFG3L1P-217ENST00000557444 2447 ntBASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 AC022898.2-201ENST00000616822 1312 ntBASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 HOXB1-202ENST00000577092 1414 ntBASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.75■□□□□ 0.27
RP1L1Q8IWN7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 Z82202.1-201ENST00000623446 1880 ntBASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 MCCD1P1-208ENST00000445732 328 ntBASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 KRT8P3-201ENST00000519669 1449 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms