Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 LINC02228-203ENST00000641970 1355 ntBASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CROCCP3Q8IVE0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.83■□□□□ 0.29
CROCCP3Q8IVE0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CROCCP3Q8IVE0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CROCCP3Q8IVE0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 AC100791.3-201ENST00000617619 330 ntBASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 MIR6084-201ENST00000622012 110 ntBASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CROCCP3Q8IVE0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CROCCP3Q8IVE0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 AC027612.3-201ENST00000413684 1047 ntBASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 OR6D1P-203ENST00000641209 4860 ntBASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CROCCP3Q8IVE0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms