Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 SLC25A6P5-201ENST00000435663 894 ntBASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 TSPY6P-201ENST00000448518 926 ntBASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 AC004264.1-201ENST00000608354 794 ntBASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUDCD3Q8IVD9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 KRT8P45-201ENST00000414328 1447 ntBASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 AL137784.2-201ENST00000607332 1000 ntBASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 AC083880.1-201ENST00000608266 535 ntBASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
NUDCD3Q8IVD9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 POU5F1P3-201ENST00000428824 1078 ntBASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUDCD3Q8IVD9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.42■□□□□ 0.54
NUDCD3Q8IVD9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms