Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS2Q86VP3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PACS2Q86VP3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PACS2Q86VP3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS2Q86VP3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PACS2Q86VP3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PACS2Q86VP3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PACS2Q86VP3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PACS2Q86VP3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PACS2Q86VP3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.66■□□□□ 0.58
PACS2Q86VP3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
PACS2Q86VP3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 AC091874.3-201ENST00000512672 1195 ntBASIC18.66■□□□□ 0.58
PACS2Q86VP3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.66■□□□□ 0.58
PACS2Q86VP3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.66■□□□□ 0.58
PACS2Q86VP3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.66■□□□□ 0.58
PACS2Q86VP3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PACS2Q86VP3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS2Q86VP3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PACS2Q86VP3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PACS2Q86VP3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
PACS2Q86VP3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.65■□□□□ 0.58
PACS2Q86VP3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PACS2Q86VP3 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.65■□□□□ 0.58
PACS2Q86VP3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.65■□□□□ 0.58
PACS2Q86VP3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.65■□□□□ 0.58
PACS2Q86VP3 KRT18P6-201ENST00000555540 1265 ntBASIC18.65■□□□□ 0.58
PACS2Q86VP3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PACS2Q86VP3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 AC105020.6-201ENST00000621523 1217 ntBASIC18.65■□□□□ 0.58
PACS2Q86VP3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.65■□□□□ 0.58
PACS2Q86VP3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.65■□□□□ 0.58
PACS2Q86VP3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 ANO7L1-203ENST00000602586 1720 ntBASIC18.65■□□□□ 0.58
PACS2Q86VP3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.65■□□□□ 0.58
PACS2Q86VP3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS2Q86VP3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PACS2Q86VP3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
PACS2Q86VP3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.64■□□□□ 0.57
PACS2Q86VP3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PACS2Q86VP3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms