Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 AC113347.1-201ENST00000413321 391 ntBASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 AL512604.3-201ENST00000569583 964 ntBASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 SDHAP1-207ENST00000440850 2000 ntBASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP1BQ7LBR1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 TREX1-205ENST00000625293 1783 ntBASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 SLC25A3P1-201ENST00000443844 931 ntBASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CHMP1BQ7LBR1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 AC093484.2-201ENST00000580996 2166 ntBASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 AC093503.3-201ENST00000624917 2352 ntBASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 AC005521.1-201ENST00000393351 872 ntBASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 HMGA1P5-201ENST00000412453 271 ntBASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 TMPOP1-202ENST00000424642 1267 ntBASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 AC010653.2-201ENST00000623505 997 ntBASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP1BQ7LBR1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CHMP1BQ7LBR1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP1BQ7LBR1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP1BQ7LBR1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP1BQ7LBR1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CHMP1BQ7LBR1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP1BQ7LBR1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.08■□□□□ 0.33
CHMP1BQ7LBR1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP1BQ7LBR1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP1BQ7LBR1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP1BQ7LBR1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP1BQ7LBR1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms