Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 AC093827.2-201ENST00000512654 315 ntBASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 AC026271.3-201ENST00000571884 352 ntBASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 AP001412.1-201ENST00000608405 714 ntBASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 TEX21P-204ENST00000641479 1693 ntBASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL4BQ6ZWI9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 AC066615.1-201ENST00000640911 628 ntBASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 AL031985.4-201ENST00000642138 673 ntBASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 KRT8P41-201ENST00000533985 1514 ntBASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFPL4BQ6ZWI9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 RCC2P6-201ENST00000526625 1557 ntBASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFPL4BQ6ZWI9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFPL4BQ6ZWI9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL4BQ6ZWI9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL4BQ6ZWI9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL4BQ6ZWI9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms