Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PRPF38BQ5VTL8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PRPF38BQ5VTL8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.05■□□□□ 0.8
PRPF38BQ5VTL8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPF38BQ5VTL8 GPR89P-201ENST00000407924 1495 ntBASIC20.05■□□□□ 0.8
PRPF38BQ5VTL8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.05■□□□□ 0.8
PRPF38BQ5VTL8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 PDPK2P-202ENST00000562415 1191 ntBASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRPF38BQ5VTL8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 ARSEP1-201ENST00000420443 635 ntBASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 ACTG1P14-201ENST00000446382 1122 ntBASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 MIR3180-4-201ENST00000582223 153 ntBASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRPF38BQ5VTL8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 MIR661-201ENST00000384842 89 ntBASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 BASP1P1-201ENST00000430708 665 ntBASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 AC067863.1-201ENST00000494933 530 ntBASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 AC109322.1-201ENST00000524499 1264 ntBASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 NKAPP1-205ENST00000585790 367 ntBASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 AC027307.3-201ENST00000594262 1100 ntBASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 AC092902.6-201ENST00000641783 218 ntBASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PRPF38BQ5VTL8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRPF38BQ5VTL8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.02■□□□□ 0.79
PRPF38BQ5VTL8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PRPF38BQ5VTL8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRPF38BQ5VTL8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 FAM207CP-201ENST00000443486 507 ntBASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PRPF38BQ5VTL8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRPF38BQ5VTL8 WWC2-AS2-201ENST00000578387 2183 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms