Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 AC069148.1-201ENST00000608741 768 ntBASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 AC104390.1-201ENST00000555663 520 ntBASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 AC010240.3-201ENST00000607688 395 ntBASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 AL391807.1-203ENST00000604392 2365 ntBASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF17Q5VTA0 AL357033.4-201ENST00000617703 1807 ntBASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 AL136038.4-201ENST00000603606 1261 ntBASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 AC120498.9-201ENST00000339021 3867 ntBASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 AC034236.2-201ENST00000606662 1610 ntBASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PRAMEF17Q5VTA0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PRAMEF17Q5VTA0 HOXB1-202ENST00000577092 1414 ntBASIC17.64■□□□□ 0.42
PRAMEF17Q5VTA0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 HCG4P8-203ENST00000443049 980 ntBASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 HEIH-201ENST00000623091 1652 ntBASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF17Q5VTA0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms