Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC145285.3-201ENST00000564603 959 ntBASIC28.02■■■□□ 2.08
CDC42BPAQ5VT25 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPAQ5VT25 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC28.02■■■□□ 2.08
CDC42BPAQ5VT25 BID-204ENST00000399767 2129 ntTSL 2 BASIC28.02■■■□□ 2.08
CDC42BPAQ5VT25 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPAQ5VT25 USP48-205ENST00000421625 2818 ntTSL 2 BASIC28.01■■■□□ 2.08
CDC42BPAQ5VT25 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
CDC42BPAQ5VT25 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC28.01■■■□□ 2.08
CDC42BPAQ5VT25 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 KRT18P58-201ENST00000527480 1120 ntBASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPAQ5VT25 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 AC112777.1-201ENST00000540175 1423 ntBASIC28■■■□□ 2.07
CDC42BPAQ5VT25 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 AF186996.4-201ENST00000467186 377 ntBASIC28■■■□□ 2.07
CDC42BPAQ5VT25 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 LITAF-211ENST00000572255 516 ntTSL 4 BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 AC139530.3-201ENST00000620344 690 ntBASIC28■■■□□ 2.07
CDC42BPAQ5VT25 AL355877.3-201ENST00000622820 899 ntBASIC28■■■□□ 2.07
CDC42BPAQ5VT25 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPAQ5VT25 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 AC139887.3-201ENST00000568585 713 ntBASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPAQ5VT25 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 HNRNPDP1-201ENST00000439535 754 ntBASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 IGHV3-22-201ENST00000520721 359 ntBASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC27.98■■■□□ 2.07
CDC42BPAQ5VT25 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 AL161938.1-201ENST00000569833 2180 ntBASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC27.97■■■□□ 2.07
CDC42BPAQ5VT25 AL032819.2-201ENST00000624543 2162 ntBASIC27.96■■■□□ 2.07
CDC42BPAQ5VT25 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CDC42BPAQ5VT25 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC27.96■■■□□ 2.07
CDC42BPAQ5VT25 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDC42BPAQ5VT25 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDC42BPAQ5VT25 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms