Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RC3H1Q5TC82 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
RC3H1Q5TC82 MIR149-201ENST00000384879 89 ntBASIC23.31■■□□□ 1.32
RC3H1Q5TC82 FAM220CP-201ENST00000395253 831 ntBASIC23.31■■□□□ 1.32
RC3H1Q5TC82 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC23.31■■□□□ 1.32
RC3H1Q5TC82 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC23.31■■□□□ 1.32
RC3H1Q5TC82 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RC3H1Q5TC82 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.31■■□□□ 1.32
RC3H1Q5TC82 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RC3H1Q5TC82 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 IGHV3-22-201ENST00000520721 359 ntBASIC23.3■■□□□ 1.32
RC3H1Q5TC82 CD63-204ENST00000546939 779 ntTSL 3 BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H1Q5TC82 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 MEG3-211ENST00000452514 461 ntTSL 3 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 AL138831.2-201ENST00000606564 490 ntBASIC23.29■■□□□ 1.32
RC3H1Q5TC82 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.29■■□□□ 1.32
RC3H1Q5TC82 AL157384.1-201ENST00000445995 2473 ntBASIC23.28■■□□□ 1.32
RC3H1Q5TC82 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 MIR940-201ENST00000401276 94 ntBASIC23.28■■□□□ 1.32
RC3H1Q5TC82 AC005104.2-201ENST00000427818 678 ntBASIC23.28■■□□□ 1.32
RC3H1Q5TC82 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 AC011467.2-201ENST00000598425 242 ntBASIC23.28■■□□□ 1.32
RC3H1Q5TC82 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RC3H1Q5TC82 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 ASL-204ENST00000395331 1538 ntTSL 5 BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.27■■□□□ 1.32
RC3H1Q5TC82 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 AP005117.1-201ENST00000584346 1413 ntBASIC23.26■■□□□ 1.31
RC3H1Q5TC82 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms