Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SNAPC4Q5SXM2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC30.22■■■□□ 2.43
SNAPC4Q5SXM2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC30.22■■■□□ 2.43
SNAPC4Q5SXM2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 Z98044.1-201ENST00000632503 1764 ntBASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 CALY-203ENST00000368558 825 ntTSL 5 BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 AL137060.1-201ENST00000618151 2648 ntBASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SNAPC4Q5SXM2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
SNAPC4Q5SXM2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC30.2■■■□□ 2.43
SNAPC4Q5SXM2 AC107918.4-202ENST00000641623 219 ntBASIC30.2■■■□□ 2.43
SNAPC4Q5SXM2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC30.2■■■□□ 2.43
SNAPC4Q5SXM2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SNAPC4Q5SXM2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
SNAPC4Q5SXM2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SNAPC4Q5SXM2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SNAPC4Q5SXM2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SNAPC4Q5SXM2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC30.2■■■□□ 2.42
SNAPC4Q5SXM2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SNAPC4Q5SXM2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC30.2■■■□□ 2.42
SNAPC4Q5SXM2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 AC092667.1-201ENST00000434301 2586 ntBASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 AL035633.1-201ENST00000406139 838 ntBASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 YBX1P5-201ENST00000509441 847 ntBASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC30.19■■■□□ 2.42
SNAPC4Q5SXM2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC30.18■■■□□ 2.42
SNAPC4Q5SXM2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC30.18■■■□□ 2.42
SNAPC4Q5SXM2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SNAPC4Q5SXM2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SNAPC4Q5SXM2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC30.18■■■□□ 2.42
SNAPC4Q5SXM2 AL596442.2-201ENST00000610240 980 ntBASIC30.18■■■□□ 2.42
SNAPC4Q5SXM2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
SNAPC4Q5SXM2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 AC105339.3-201ENST00000560043 636 ntBASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC30.17■■■□□ 2.42
SNAPC4Q5SXM2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms