Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDH1Q08174 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.89■□□□□ 0.45
PCDH1Q08174 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDH1Q08174 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDH1Q08174 AL390955.1-201ENST00000428694 934 ntBASIC17.89■□□□□ 0.45
PCDH1Q08174 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.89■□□□□ 0.45
PCDH1Q08174 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDH1Q08174 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDH1Q08174 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDH1Q08174 CR769767.2-201ENST00000622735 460 ntBASIC17.89■□□□□ 0.45
PCDH1Q08174 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH1Q08174 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH1Q08174 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH1Q08174 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH1Q08174 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH1Q08174 AC090340.1-201ENST00000620778 4980 ntBASIC17.89■□□□□ 0.45
PCDH1Q08174 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH1Q08174 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH1Q08174 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCDH1Q08174 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH1Q08174 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH1Q08174 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH1Q08174 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH1Q08174 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH1Q08174 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
PCDH1Q08174 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 TSPY15P-201ENST00000457163 923 ntBASIC17.87■□□□□ 0.45
PCDH1Q08174 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDH1Q08174 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDH1Q08174 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDH1Q08174 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDH1Q08174 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDH1Q08174 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.87■□□□□ 0.45
PCDH1Q08174 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH1Q08174 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH1Q08174 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH1Q08174 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDH1Q08174 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH1Q08174 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDH1Q08174 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDH1Q08174 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH1Q08174 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
PCDH1Q08174 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
PCDH1Q08174 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDH1Q08174 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDH1Q08174 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
PCDH1Q08174 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH1Q08174 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH1Q08174 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDH1Q08174 MIR3180-4-201ENST00000582223 153 ntBASIC17.86■□□□□ 0.45
PCDH1Q08174 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDH1Q08174 AC010947.1-201ENST00000623454 693 ntBASIC17.86■□□□□ 0.45
PCDH1Q08174 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms