Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.8■□□□□ 0.76
SOX4Q06945 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.79■□□□□ 0.76
SOX4Q06945 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.79■□□□□ 0.76
SOX4Q06945 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOX4Q06945 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SOX4Q06945 MYLKP1-201ENST00000509077 1580 ntBASIC19.79■□□□□ 0.76
SOX4Q06945 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.79■□□□□ 0.76
SOX4Q06945 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOX4Q06945 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOX4Q06945 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOX4Q06945 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SOX4Q06945 KRT18P48-201ENST00000434763 852 ntBASIC19.79■□□□□ 0.76
SOX4Q06945 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.79■□□□□ 0.76
SOX4Q06945 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.79■□□□□ 0.76
SOX4Q06945 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.79■□□□□ 0.76
SOX4Q06945 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOX4Q06945 AC005082.1-201ENST00000413042 2259 ntBASIC19.79■□□□□ 0.76
SOX4Q06945 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.79■□□□□ 0.76
SOX4Q06945 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOX4Q06945 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOX4Q06945 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SOX4Q06945 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SOX4Q06945 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOX4Q06945 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SOX4Q06945 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.78■□□□□ 0.76
SOX4Q06945 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SOX4Q06945 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
SOX4Q06945 AC009065.1-201ENST00000564055 1225 ntBASIC19.78■□□□□ 0.76
SOX4Q06945 AP002414.4-201ENST00000589764 1148 ntBASIC19.78■□□□□ 0.76
SOX4Q06945 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 AC024563.2-201ENST00000603282 481 ntBASIC19.78■□□□□ 0.76
SOX4Q06945 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.78■□□□□ 0.76
SOX4Q06945 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX4Q06945 SDHAP2-201ENST00000455183 2001 ntBASIC19.78■□□□□ 0.76
SOX4Q06945 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SOX4Q06945 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SOX4Q06945 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SOX4Q06945 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX4Q06945 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.77■□□□□ 0.76
SOX4Q06945 ANO7L1-203ENST00000602586 1720 ntBASIC19.77■□□□□ 0.76
SOX4Q06945 MIR149-201ENST00000384879 89 ntBASIC19.77■□□□□ 0.76
SOX4Q06945 IGHGP-201ENST00000390555 1178 ntBASIC19.77■□□□□ 0.76
SOX4Q06945 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SOX4Q06945 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.77■□□□□ 0.76
SOX4Q06945 CHCHD2P8-201ENST00000429873 447 ntBASIC19.77■□□□□ 0.76
SOX4Q06945 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.77■□□□□ 0.76
SOX4Q06945 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SOX4Q06945 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX4Q06945 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.77■□□□□ 0.76
SOX4Q06945 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
SOX4Q06945 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SOX4Q06945 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.77■□□□□ 0.76
SOX4Q06945 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX4Q06945 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX4Q06945 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX4Q06945 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SOX4Q06945 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.77■□□□□ 0.75
SOX4Q06945 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SOX4Q06945 AC112777.1-201ENST00000540175 1423 ntBASIC19.76■□□□□ 0.75
SOX4Q06945 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SOX4Q06945 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.76■□□□□ 0.75
SOX4Q06945 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SOX4Q06945 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.76■□□□□ 0.75
SOX4Q06945 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.76■□□□□ 0.75
SOX4Q06945 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.76■□□□□ 0.75
SOX4Q06945 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.76■□□□□ 0.75
SOX4Q06945 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.76■□□□□ 0.75
SOX4Q06945 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.76■□□□□ 0.75
SOX4Q06945 AC092329.2-201ENST00000598402 547 ntBASIC19.76■□□□□ 0.75
SOX4Q06945 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.76■□□□□ 0.75
SOX4Q06945 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
SOX4Q06945 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.76■□□□□ 0.75
SOX4Q06945 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.76■□□□□ 0.75
SOX4Q06945 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX4Q06945 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms