Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.34■□□□□ 0.21
NKX6-1P78426 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.34■□□□□ 0.21
NKX6-1P78426 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.34■□□□□ 0.21
NKX6-1P78426 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
NKX6-1P78426 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.34■□□□□ 0.21
NKX6-1P78426 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-1P78426 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NKX6-1P78426 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.34■□□□□ 0.21
NKX6-1P78426 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-1P78426 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NKX6-1P78426 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-1P78426 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-1P78426 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.34■□□□□ 0.21
NKX6-1P78426 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-1P78426 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
NKX6-1P78426 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NKX6-1P78426 AC141586.3-201ENST00000562166 1838 ntBASIC16.33■□□□□ 0.21
NKX6-1P78426 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NKX6-1P78426 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.33■□□□□ 0.21
NKX6-1P78426 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
NKX6-1P78426 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.33■□□□□ 0.2
NKX6-1P78426 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.33■□□□□ 0.2
NKX6-1P78426 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NKX6-1P78426 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX6-1P78426 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.33■□□□□ 0.2
NKX6-1P78426 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.33■□□□□ 0.2
NKX6-1P78426 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX6-1P78426 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.33■□□□□ 0.2
NKX6-1P78426 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NKX6-1P78426 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.33■□□□□ 0.2
NKX6-1P78426 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX6-1P78426 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.33■□□□□ 0.2
NKX6-1P78426 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX6-1P78426 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-1P78426 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.32■□□□□ 0.2
NKX6-1P78426 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX6-1P78426 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX6-1P78426 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.32■□□□□ 0.2
NKX6-1P78426 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX6-1P78426 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX6-1P78426 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.32■□□□□ 0.2
NKX6-1P78426 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.32■□□□□ 0.2
NKX6-1P78426 AP003041.3-201ENST00000527151 707 ntBASIC16.32■□□□□ 0.2
NKX6-1P78426 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX6-1P78426 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.32■□□□□ 0.2
NKX6-1P78426 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.32■□□□□ 0.2
NKX6-1P78426 AL136038.3-201ENST00000561909 1096 ntBASIC16.32■□□□□ 0.2
NKX6-1P78426 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 AL032819.2-201ENST00000624543 2162 ntBASIC16.32■□□□□ 0.2
NKX6-1P78426 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-1P78426 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NKX6-1P78426 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NKX6-1P78426 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NKX6-1P78426 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.31■□□□□ 0.2
NKX6-1P78426 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NKX6-1P78426 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NKX6-1P78426 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
NKX6-1P78426 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-1P78426 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.31■□□□□ 0.2
NKX6-1P78426 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms