Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC128688.1-201ENST00000487626 519 ntBASIC18.09■□□□□ 0.49
YBX1P67809 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.09■□□□□ 0.49
YBX1P67809 AC010653.2-201ENST00000623505 997 ntBASIC18.09■□□□□ 0.49
YBX1P67809 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
YBX1P67809 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
YBX1P67809 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
YBX1P67809 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.09■□□□□ 0.49
YBX1P67809 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
YBX1P67809 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
YBX1P67809 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
YBX1P67809 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
YBX1P67809 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
YBX1P67809 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.08■□□□□ 0.49
YBX1P67809 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
YBX1P67809 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
YBX1P67809 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
YBX1P67809 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
YBX1P67809 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.08■□□□□ 0.49
YBX1P67809 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
YBX1P67809 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.08■□□□□ 0.48
YBX1P67809 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 AC005521.1-201ENST00000393351 872 ntBASIC18.08■□□□□ 0.48
YBX1P67809 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.08■□□□□ 0.48
YBX1P67809 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.08■□□□□ 0.48
YBX1P67809 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.08■□□□□ 0.48
YBX1P67809 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.48
YBX1P67809 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.08■□□□□ 0.48
YBX1P67809 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.08■□□□□ 0.48
YBX1P67809 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.08■□□□□ 0.48
YBX1P67809 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 AL499627.1-201ENST00000569373 2188 ntBASIC18.08■□□□□ 0.48
YBX1P67809 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.08■□□□□ 0.48
YBX1P67809 AC126763.1-201ENST00000552015 2118 ntBASIC18.08■□□□□ 0.48
YBX1P67809 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
YBX1P67809 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.08■□□□□ 0.48
YBX1P67809 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.08■□□□□ 0.48
YBX1P67809 AC036111.1-201ENST00000533973 1582 ntBASIC18.08■□□□□ 0.48
YBX1P67809 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.08■□□□□ 0.48
YBX1P67809 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YBX1P67809 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
YBX1P67809 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 AP000997.3-201ENST00000623333 2250 ntBASIC18.07■□□□□ 0.48
YBX1P67809 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.07■□□□□ 0.48
YBX1P67809 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
YBX1P67809 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.07■□□□□ 0.48
YBX1P67809 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.07■□□□□ 0.48
YBX1P67809 KRT18P57-201ENST00000443599 1254 ntBASIC18.07■□□□□ 0.48
YBX1P67809 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.07■□□□□ 0.48
YBX1P67809 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.07■□□□□ 0.48
YBX1P67809 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.07■□□□□ 0.48
YBX1P67809 CR769767.2-201ENST00000622735 460 ntBASIC18.07■□□□□ 0.48
YBX1P67809 AC083906.6-201ENST00000641366 219 ntBASIC18.07■□□□□ 0.48
YBX1P67809 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.07■□□□□ 0.48
YBX1P67809 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.07■□□□□ 0.48
YBX1P67809 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YBX1P67809 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
YBX1P67809 AC073508.3-201ENST00000619697 1419 ntBASIC18.06■□□□□ 0.48
YBX1P67809 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.06■□□□□ 0.48
YBX1P67809 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.06■□□□□ 0.48
YBX1P67809 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
YBX1P67809 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
YBX1P67809 AC099343.3-201ENST00000605834 2503 ntBASIC18.06■□□□□ 0.48
YBX1P67809 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.06■□□□□ 0.48
YBX1P67809 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
YBX1P67809 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
YBX1P67809 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
YBX1P67809 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms