Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
USP46P62068 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
USP46P62068 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.5■□□□□ 0.71
USP46P62068 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.5■□□□□ 0.71
USP46P62068 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.5■□□□□ 0.71
USP46P62068 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.5■□□□□ 0.71
USP46P62068 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.5■□□□□ 0.71
USP46P62068 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
USP46P62068 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
USP46P62068 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.5■□□□□ 0.71
USP46P62068 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
USP46P62068 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP46P62068 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.49■□□□□ 0.71
USP46P62068 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.49■□□□□ 0.71
USP46P62068 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
USP46P62068 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.49■□□□□ 0.71
USP46P62068 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
USP46P62068 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
USP46P62068 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.49■□□□□ 0.71
USP46P62068 AC083906.6-201ENST00000641366 219 ntBASIC19.49■□□□□ 0.71
USP46P62068 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
USP46P62068 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.49■□□□□ 0.71
USP46P62068 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.49■□□□□ 0.71
USP46P62068 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
USP46P62068 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
USP46P62068 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP46P62068 AC098818.2-201ENST00000564925 2320 ntBASIC19.48■□□□□ 0.71
USP46P62068 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.48■□□□□ 0.71
USP46P62068 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.48■□□□□ 0.71
USP46P62068 AL391807.1-203ENST00000604392 2365 ntBASIC19.48■□□□□ 0.71
USP46P62068 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 BX323043.1-201ENST00000641006 1765 ntBASIC19.48■□□□□ 0.71
USP46P62068 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
USP46P62068 HLA-F-220ENST00000434407 884 ntBASIC19.48■□□□□ 0.71
USP46P62068 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.48■□□□□ 0.71
USP46P62068 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.48■□□□□ 0.71
USP46P62068 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.48■□□□□ 0.71
USP46P62068 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.48■□□□□ 0.71
USP46P62068 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.48■□□□□ 0.71
USP46P62068 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP46P62068 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.47■□□□□ 0.71
USP46P62068 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.47■□□□□ 0.71
USP46P62068 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 AL645929.1-201ENST00000420084 975 ntBASIC19.47■□□□□ 0.71
USP46P62068 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.47■□□□□ 0.71
USP46P62068 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.47■□□□□ 0.71
USP46P62068 AL136038.4-201ENST00000603606 1261 ntBASIC19.47■□□□□ 0.71
USP46P62068 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.47■□□□□ 0.71
USP46P62068 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
USP46P62068 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms