Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.24■□□□□ 0.19
SEC61A1P61619 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.24■□□□□ 0.19
SEC61A1P61619 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.24■□□□□ 0.19
SEC61A1P61619 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.24■□□□□ 0.19
SEC61A1P61619 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.24■□□□□ 0.19
SEC61A1P61619 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.24■□□□□ 0.19
SEC61A1P61619 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SEC61A1P61619 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.24■□□□□ 0.19
SEC61A1P61619 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SEC61A1P61619 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.24■□□□□ 0.19
SEC61A1P61619 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.24■□□□□ 0.19
SEC61A1P61619 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.24■□□□□ 0.19
SEC61A1P61619 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.24■□□□□ 0.19
SEC61A1P61619 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61A1P61619 Z98044.1-201ENST00000632503 1764 ntBASIC16.23■□□□□ 0.19
SEC61A1P61619 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61A1P61619 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61A1P61619 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SEC61A1P61619 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SEC61A1P61619 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.23■□□□□ 0.19
SEC61A1P61619 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SEC61A1P61619 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.23■□□□□ 0.19
SEC61A1P61619 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61A1P61619 KRT16P1-201ENST00000399124 1418 ntBASIC16.23■□□□□ 0.19
SEC61A1P61619 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61A1P61619 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.23■□□□□ 0.19
SEC61A1P61619 KSR1P1-201ENST00000446298 240 ntBASIC16.23■□□□□ 0.19
SEC61A1P61619 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61A1P61619 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SEC61A1P61619 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61A1P61619 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61A1P61619 NUDT16P1-203ENST00000513809 620 ntBASIC16.23■□□□□ 0.19
SEC61A1P61619 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SEC61A1P61619 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.23■□□□□ 0.19
SEC61A1P61619 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.23■□□□□ 0.19
SEC61A1P61619 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.23■□□□□ 0.19
SEC61A1P61619 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.23■□□□□ 0.19
SEC61A1P61619 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.23■□□□□ 0.19
SEC61A1P61619 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61A1P61619 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SEC61A1P61619 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61A1P61619 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SEC61A1P61619 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
SEC61A1P61619 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.23■□□□□ 0.19
SEC61A1P61619 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61A1P61619 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
SEC61A1P61619 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SEC61A1P61619 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SEC61A1P61619 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.22■□□□□ 0.19
SEC61A1P61619 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SEC61A1P61619 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.22■□□□□ 0.19
SEC61A1P61619 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.22■□□□□ 0.19
SEC61A1P61619 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.22■□□□□ 0.19
SEC61A1P61619 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.22■□□□□ 0.19
SEC61A1P61619 REXO1L10P-201ENST00000615707 1290 ntBASIC16.22■□□□□ 0.19
SEC61A1P61619 REXO1L12P-201ENST00000622156 912 ntBASIC16.22■□□□□ 0.19
SEC61A1P61619 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.22■□□□□ 0.19
SEC61A1P61619 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.22■□□□□ 0.19
SEC61A1P61619 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SEC61A1P61619 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SEC61A1P61619 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC61A1P61619 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
SEC61A1P61619 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SEC61A1P61619 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SEC61A1P61619 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.21■□□□□ 0.19
SEC61A1P61619 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SEC61A1P61619 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SEC61A1P61619 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SEC61A1P61619 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SEC61A1P61619 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SEC61A1P61619 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SEC61A1P61619 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.21■□□□□ 0.19
SEC61A1P61619 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SEC61A1P61619 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.21■□□□□ 0.19
SEC61A1P61619 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.21■□□□□ 0.19
SEC61A1P61619 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.21■□□□□ 0.19
SEC61A1P61619 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms