Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCR4P61073 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.91■□□□□ 0.3
CXCR4P61073 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.91■□□□□ 0.3
CXCR4P61073 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.91■□□□□ 0.3
CXCR4P61073 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCR4P61073 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.91■□□□□ 0.3
CXCR4P61073 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CXCR4P61073 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.91■□□□□ 0.3
CXCR4P61073 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.91■□□□□ 0.3
CXCR4P61073 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.91■□□□□ 0.3
CXCR4P61073 AC060766.5-201ENST00000590539 871 ntBASIC16.91■□□□□ 0.3
CXCR4P61073 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.91■□□□□ 0.3
CXCR4P61073 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.91■□□□□ 0.3
CXCR4P61073 AL121829.2-201ENST00000620908 328 ntBASIC16.91■□□□□ 0.3
CXCR4P61073 MYC-209ENST00000641252 345 ntBASIC16.91■□□□□ 0.3
CXCR4P61073 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCR4P61073 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.91■□□□□ 0.3
CXCR4P61073 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCR4P61073 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCR4P61073 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CXCR4P61073 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CXCR4P61073 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
CXCR4P61073 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CXCR4P61073 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCR4P61073 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CXCR4P61073 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CXCR4P61073 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 GUSBP6-202ENST00000438529 1198 ntBASIC16.9■□□□□ 0.3
CXCR4P61073 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCR4P61073 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCR4P61073 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.9■□□□□ 0.3
CXCR4P61073 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CXCR4P61073 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCR4P61073 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CXCR4P61073 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CXCR4P61073 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CXCR4P61073 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CXCR4P61073 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CXCR4P61073 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCR4P61073 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCR4P61073 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CXCR4P61073 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.9■□□□□ 0.3
CXCR4P61073 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCR4P61073 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CXCR4P61073 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CXCR4P61073 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.89■□□□□ 0.29
CXCR4P61073 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCR4P61073 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCR4P61073 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CXCR4P61073 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CXCR4P61073 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCR4P61073 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CXCR4P61073 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.89■□□□□ 0.29
CXCR4P61073 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.89■□□□□ 0.29
CXCR4P61073 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.89■□□□□ 0.29
CXCR4P61073 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CXCR4P61073 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CXCR4P61073 TSPY6P-201ENST00000448518 926 ntBASIC16.89■□□□□ 0.29
CXCR4P61073 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.89■□□□□ 0.29
CXCR4P61073 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.89■□□□□ 0.29
CXCR4P61073 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CXCR4P61073 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
CXCR4P61073 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.89■□□□□ 0.29
CXCR4P61073 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.89■□□□□ 0.29
CXCR4P61073 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.89■□□□□ 0.29
CXCR4P61073 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CXCR4P61073 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.89■□□□□ 0.29
CXCR4P61073 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCR4P61073 TNRC18P3-201ENST00000441896 2691 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms