Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SRP54P61011 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRP54P61011 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.28■□□□□ 0.52
SRP54P61011 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.28■□□□□ 0.52
SRP54P61011 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.28■□□□□ 0.52
SRP54P61011 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SRP54P61011 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.28■□□□□ 0.52
SRP54P61011 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRP54P61011 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRP54P61011 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SRP54P61011 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SRP54P61011 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRP54P61011 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRP54P61011 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.28■□□□□ 0.52
SRP54P61011 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.28■□□□□ 0.52
SRP54P61011 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRP54P61011 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
SRP54P61011 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP54P61011 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP54P61011 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP54P61011 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SRP54P61011 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.27■□□□□ 0.52
SRP54P61011 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP54P61011 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SRP54P61011 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.27■□□□□ 0.52
SRP54P61011 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.27■□□□□ 0.52
SRP54P61011 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP54P61011 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP54P61011 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.27■□□□□ 0.52
SRP54P61011 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
SRP54P61011 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP54P61011 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.27■□□□□ 0.52
SRP54P61011 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
SRP54P61011 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.27■□□□□ 0.52
SRP54P61011 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.27■□□□□ 0.52
SRP54P61011 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
SRP54P61011 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP54P61011 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SRP54P61011 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP54P61011 HEIH-201ENST00000623091 1652 ntBASIC18.27■□□□□ 0.52
SRP54P61011 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SRP54P61011 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.27■□□□□ 0.51
SRP54P61011 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SRP54P61011 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.27■□□□□ 0.51
SRP54P61011 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SRP54P61011 AL161938.1-201ENST00000569833 2180 ntBASIC18.27■□□□□ 0.51
SRP54P61011 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SRP54P61011 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SRP54P61011 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SRP54P61011 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.26■□□□□ 0.51
SRP54P61011 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SRP54P61011 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.26■□□□□ 0.51
SRP54P61011 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SRP54P61011 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP54P61011 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP54P61011 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP54P61011 AL020996.1-203ENST00000536896 2307 ntBASIC18.26■□□□□ 0.51
SRP54P61011 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP54P61011 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.26■□□□□ 0.51
SRP54P61011 HCG4P8-203ENST00000443049 980 ntBASIC18.26■□□□□ 0.51
SRP54P61011 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SRP54P61011 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SRP54P61011 AC011498.5-201ENST00000592027 486 ntBASIC18.26■□□□□ 0.51
SRP54P61011 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SRP54P61011 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SRP54P61011 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP54P61011 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.26■□□□□ 0.51
SRP54P61011 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.26■□□□□ 0.51
SRP54P61011 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP54P61011 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SRP54P61011 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP54P61011 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 AL162741.1-201ENST00000565563 1558 ntBASIC18.25■□□□□ 0.51
SRP54P61011 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SRP54P61011 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
SRP54P61011 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
SRP54P61011 AC005332.7-201ENST00000614046 2005 ntBASIC18.25■□□□□ 0.51
SRP54P61011 Z98044.1-201ENST00000632503 1764 ntBASIC18.25■□□□□ 0.51
SRP54P61011 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.25■□□□□ 0.51
SRP54P61011 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SRP54P61011 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.25■□□□□ 0.51
SRP54P61011 MIR3180-4-201ENST00000582223 153 ntBASIC18.25■□□□□ 0.51
SRP54P61011 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.25■□□□□ 0.51
SRP54P61011 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.25■□□□□ 0.51
SRP54P61011 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 AL357033.4-201ENST00000617703 1807 ntBASIC18.25■□□□□ 0.51
SRP54P61011 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SRP54P61011 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SRP54P61011 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRP54P61011 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
SRP54P61011 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms