Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXG1P55316 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXG1P55316 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
FOXG1P55316 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FOXG1P55316 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
FOXG1P55316 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXG1P55316 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.24■□□□□ 0.19
FOXG1P55316 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXG1P55316 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXG1P55316 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXG1P55316 LINC01311-201ENST00000565162 1445 ntBASIC16.24■□□□□ 0.19
FOXG1P55316 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXG1P55316 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
FOXG1P55316 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXG1P55316 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXG1P55316 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
FOXG1P55316 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
FOXG1P55316 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXG1P55316 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 MYLKP1-201ENST00000509077 1580 ntBASIC16.23■□□□□ 0.19
FOXG1P55316 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
FOXG1P55316 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 HBZP1-201ENST00000354915 429 ntBASIC16.23■□□□□ 0.19
FOXG1P55316 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.23■□□□□ 0.19
FOXG1P55316 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 AC034232.1-201ENST00000506026 1064 ntBASIC16.23■□□□□ 0.19
FOXG1P55316 VENTXP5-201ENST00000523979 775 ntBASIC16.23■□□□□ 0.19
FOXG1P55316 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.23■□□□□ 0.19
FOXG1P55316 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
FOXG1P55316 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 AL163051.1-201ENST00000569214 1512 ntBASIC16.23■□□□□ 0.19
FOXG1P55316 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXG1P55316 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
FOXG1P55316 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXG1P55316 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXG1P55316 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
FOXG1P55316 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXG1P55316 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXG1P55316 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXG1P55316 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXG1P55316 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
FOXG1P55316 AC112777.1-201ENST00000540175 1423 ntBASIC16.22■□□□□ 0.19
FOXG1P55316 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXG1P55316 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXG1P55316 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXG1P55316 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXG1P55316 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXG1P55316 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXG1P55316 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXG1P55316 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXG1P55316 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXG1P55316 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXG1P55316 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXG1P55316 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXG1P55316 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXG1P55316 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
FOXG1P55316 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms