Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.43■□□□□ 0.86
PMS1P54277 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PMS1P54277 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.42■□□□□ 0.86
PMS1P54277 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.42■□□□□ 0.86
PMS1P54277 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PMS1P54277 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PMS1P54277 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PMS1P54277 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMS1P54277 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PMS1P54277 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMS1P54277 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMS1P54277 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PMS1P54277 TSPY15P-201ENST00000457163 923 ntBASIC20.42■□□□□ 0.86
PMS1P54277 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.42■□□□□ 0.86
PMS1P54277 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.42■□□□□ 0.86
PMS1P54277 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.42■□□□□ 0.86
PMS1P54277 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.42■□□□□ 0.86
PMS1P54277 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.42■□□□□ 0.86
PMS1P54277 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.42■□□□□ 0.86
PMS1P54277 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.42■□□□□ 0.86
PMS1P54277 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMS1P54277 AC036111.1-201ENST00000533973 1582 ntBASIC20.42■□□□□ 0.86
PMS1P54277 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
PMS1P54277 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMS1P54277 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PMS1P54277 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.41■□□□□ 0.86
PMS1P54277 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.41■□□□□ 0.86
PMS1P54277 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.41■□□□□ 0.86
PMS1P54277 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.41■□□□□ 0.86
PMS1P54277 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.41■□□□□ 0.86
PMS1P54277 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PMS1P54277 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.41■□□□□ 0.86
PMS1P54277 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PMS1P54277 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.41■□□□□ 0.86
PMS1P54277 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS1P54277 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PMS1P54277 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS1P54277 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS1P54277 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS1P54277 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS1P54277 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PMS1P54277 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PMS1P54277 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS1P54277 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.4■□□□□ 0.86
PMS1P54277 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.4■□□□□ 0.86
PMS1P54277 SNORA78-201ENST00000459373 127 ntBASIC20.4■□□□□ 0.86
PMS1P54277 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS1P54277 AP003041.3-201ENST00000527151 707 ntBASIC20.4■□□□□ 0.86
PMS1P54277 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.4■□□□□ 0.86
PMS1P54277 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
PMS1P54277 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS1P54277 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
PMS1P54277 LETM1P2-201ENST00000597330 2178 ntBASIC20.39■□□□□ 0.86
PMS1P54277 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PMS1P54277 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
PMS1P54277 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.39■□□□□ 0.86
PMS1P54277 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.39■□□□□ 0.86
PMS1P54277 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PMS1P54277 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.39■□□□□ 0.86
PMS1P54277 AC034236.2-201ENST00000606662 1610 ntBASIC20.39■□□□□ 0.86
PMS1P54277 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PMS1P54277 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PMS1P54277 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PMS1P54277 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PMS1P54277 UNC93B2-201ENST00000285383 730 ntBASIC20.39■□□□□ 0.85
PMS1P54277 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.39■□□□□ 0.85
PMS1P54277 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PMS1P54277 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PMS1P54277 AL355075.4-201ENST00000554988 638 ntBASIC20.39■□□□□ 0.85
PMS1P54277 MIR3180-5-201ENST00000583743 153 ntBASIC20.39■□□□□ 0.85
PMS1P54277 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.39■□□□□ 0.85
PMS1P54277 PCDHB18P-201ENST00000524813 2368 ntBASIC20.39■□□□□ 0.85
PMS1P54277 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.39■□□□□ 0.85
PMS1P54277 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PMS1P54277 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.39■□□□□ 0.85
PMS1P54277 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PMS1P54277 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PMS1P54277 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS1P54277 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS1P54277 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.38■□□□□ 0.85
PMS1P54277 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS1P54277 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PMS1P54277 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS1P54277 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PMS1P54277 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PMS1P54277 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PMS1P54277 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms