Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.9■□□□□ 0.94
LBX1P52954 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LBX1P52954 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LBX1P52954 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.89■□□□□ 0.94
LBX1P52954 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LBX1P52954 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LBX1P52954 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LBX1P52954 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LBX1P52954 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
LBX1P52954 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LBX1P52954 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LBX1P52954 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LBX1P52954 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.89■□□□□ 0.93
LBX1P52954 AC002472.2-201ENST00000442739 958 ntBASIC20.89■□□□□ 0.93
LBX1P52954 FAM86GP-201ENST00000448322 971 ntBASIC20.89■□□□□ 0.93
LBX1P52954 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LBX1P52954 AC068472.1-201ENST00000474589 881 ntBASIC20.89■□□□□ 0.93
LBX1P52954 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LBX1P52954 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.89■□□□□ 0.93
LBX1P52954 AC109322.1-201ENST00000524499 1264 ntBASIC20.89■□□□□ 0.93
LBX1P52954 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.89■□□□□ 0.93
LBX1P52954 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.89■□□□□ 0.93
LBX1P52954 PDPK2P-202ENST00000562415 1191 ntBASIC20.89■□□□□ 0.93
LBX1P52954 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LBX1P52954 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
LBX1P52954 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.89■□□□□ 0.93
LBX1P52954 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LBX1P52954 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LBX1P52954 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LBX1P52954 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.88■□□□□ 0.93
LBX1P52954 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.88■□□□□ 0.93
LBX1P52954 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.88■□□□□ 0.93
LBX1P52954 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.88■□□□□ 0.93
LBX1P52954 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LBX1P52954 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.88■□□□□ 0.93
LBX1P52954 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
LBX1P52954 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.88■□□□□ 0.93
LBX1P52954 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 AC073621.1-201ENST00000392730 636 ntBASIC20.88■□□□□ 0.93
LBX1P52954 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.88■□□□□ 0.93
LBX1P52954 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.88■□□□□ 0.93
LBX1P52954 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.88■□□□□ 0.93
LBX1P52954 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LBX1P52954 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.88■□□□□ 0.93
LBX1P52954 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.88■□□□□ 0.93
LBX1P52954 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.88■□□□□ 0.93
LBX1P52954 AC004835.2-201ENST00000603762 682 ntBASIC20.88■□□□□ 0.93
LBX1P52954 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.88■□□□□ 0.93
LBX1P52954 AC133561.1-201ENST00000568600 2415 ntBASIC20.88■□□□□ 0.93
LBX1P52954 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.88■□□□□ 0.93
LBX1P52954 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
LBX1P52954 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBX1P52954 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
LBX1P52954 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LBX1P52954 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LBX1P52954 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.87■□□□□ 0.93
LBX1P52954 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.87■□□□□ 0.93
LBX1P52954 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.87■□□□□ 0.93
LBX1P52954 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBX1P52954 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.87■□□□□ 0.93
LBX1P52954 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBX1P52954 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBX1P52954 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LBX1P52954 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LBX1P52954 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBX1P52954 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LBX1P52954 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.86■□□□□ 0.93
LBX1P52954 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.86■□□□□ 0.93
LBX1P52954 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBX1P52954 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.86■□□□□ 0.93
LBX1P52954 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.86■□□□□ 0.93
LBX1P52954 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.86■□□□□ 0.93
LBX1P52954 RN7SL204P-201ENST00000582831 262 ntBASIC20.86■□□□□ 0.93
LBX1P52954 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LBX1P52954 AC084346.2-201ENST00000607097 949 ntBASIC20.86■□□□□ 0.93
LBX1P52954 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.86■□□□□ 0.93
LBX1P52954 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms